MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
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Genome Info
Taxon Description
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NCBI Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,806
rRNA: 9
tRNA: 59
tmRNA: 1
Total number of protein coding genes annotated/found:
1,747
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Items 21 - 40
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Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000001.1
MBF0770668.1
Genome Viewer
NA
AA
858/286
21632-20775
sugar ABC transporter permease
SEQF5026|JADGKX010000001.1
MBF0770669.1
Genome Viewer
NA
AA
1356/452
22990-21635
sugar ABC transporter permease
SEQF5026|JADGKX010000001.1
MBF0770670.1
Genome Viewer
NA
AA
1218/406
24244-23027
extracellular solute-binding protein
SEQF5026|JADGKX010000001.1
MBF0770671.1
Genome Viewer
NA
AA
1104/368
25459-24356
sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC
SEQF5026|JADGKX010000001.1
MBF0770672.1
Genome Viewer
NA
AA
663/221
26142-25480
beta-phosphoglucomutase
SEQF5026|JADGKX010000001.1
MBF0770673.1
Genome Viewer
NA
AA
2271/757
28397-26127
glycoside hydrolase family 65 protein
SEQF5026|JADGKX010000001.1
MBF0770674.1
Genome Viewer
NA
AA
1725/575
30276-28552
alpha-glycosidase
SEQF5026|JADGKX010000001.1
MBF0770675.1
Genome Viewer
NA
AA
1656/552
31951-30296
alpha-glucosidase
SEQF5026|JADGKX010000001.1
MBF0770676.1
Genome Viewer
NA
AA
945/315
33000-32056
LacI family DNA-binding transcriptional regulator
SEQF5026|JADGKX010000001.1
MBF0770677.1
Genome Viewer
NA
AA
972/324
34124-33153
ribose-phosphate diphosphokinase
SEQF5026|JADGKX010000001.1
MBF0770678.1
Genome Viewer
NA
AA
1386/462
35620-34235
bifunctional UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase GlmU
SEQF5026|JADGKX010000001.1
MBF0770679.1
Genome Viewer
NA
AA
837/279
36504-35668
pur operon repressor
SEQF5026|JADGKX010000001.1
MBF0770680.1
Genome Viewer
NA
AA
240/80
36861-36622
Veg family protein
SEQF5026|JADGKX010000001.1
MBF0770681.1
Genome Viewer
NA
AA
891/297
37827-36937
16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA
SEQF5026|JADGKX010000001.1
MBF0770682.1
Genome Viewer
NA
AA
564/188
38380-37817
ribonuclease M5
SEQF5026|JADGKX010000001.1
MBF0770683.1
Genome Viewer
NA
AA
774/258
39137-38364
TatD family hydrolase
SEQF5026|JADGKX010000001.1
MBF0770684.1
Genome Viewer
NA
AA
1977/659
41113-39137
methionine--tRNA ligase
SEQF5026|JADGKX010000001.1
MBF0770685.1
Genome Viewer
NA
AA
1032/344
42242-41211
magnesium-transporting ATPase
SEQF5026|JADGKX010000001.1
MBF0770686.1
Genome Viewer
NA
AA
588/196
43128-42541
TPM domain-containing protein
SEQF5026|JADGKX010000001.1
MBF0770687.1
Genome Viewer
NA
AA
489/163
43606-43118
competence protein ComE
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Items 21 - 40
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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